CDS

Accession Number TCMCG051C29606
gbkey CDS
Protein Id XP_024465001.1
Location complement(join(3671083..3671209,3671418..3671639,3673101..3673140,3673302..3673366,3673497..3673661,3673822..3673899,3674289..3674467))
Gene LOC7475944
GeneID 7475944
Organism Populus trichocarpa

Protein

Length 291aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024609233.1
Definition serine/arginine-rich SC35-like splicing factor SCL28 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category A
Description splicing factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12900        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000244        [VIEW IN EMBL-EBI]
GO:0000245        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000381        [VIEW IN EMBL-EBI]
GO:0000387        [VIEW IN EMBL-EBI]
GO:0000395        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006376        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033119        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045292        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048024        [VIEW IN EMBL-EBI]
GO:0048025        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050686        [VIEW IN EMBL-EBI]
GO:0050733        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051082        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCAAGGCACAGAAGCCGGAGCAGAAGCTACAGTCCTGGTCGCCGTAGCCGAACCCCTCCTCGGGGCCGTAAGCGATACGATGACGAAGGTCGCCACCGTGACACCCGTTCTTACCGTGACCGTCGCTCTCCTGCTTCATCTGGCTTGCTCATTCGCAATCTCCCTCTCGACGCCAGGCCTGAAGATCTTAGGGGGCCATTTGAGAAATTTGGTCCTTTGAAAGATATTTATCTGCCCAAGAATTACCACACTGGGGAACCACGAGGGTTTGGATTTGTGAAGTATCGTTACGGTGAAGATGCAGCTGAAGCAAAAAAACGGATGGACCATAAAATCATTGGTGGACGTGAGATAAGAATTGTCTTTGCTGAGGAGAACAGAAAAACACCTCAAGAAATGCGCAGAACTCCTCGCACAAGTGACCGACATGGAGGCAGCCATGGAGGGAGAACACCACCAAGGTCCCCAAGACATCGATATCGTTCCTACTCACGCTCACCTTCACCTGCCAGGCATGATTCGAGGGATCGCGGTGTGAAGGAGGATTATTGCTCTCCACGGAGATCAAGATCCATTTCACGCTCTCGTTCTCCACGAGATGAGAGGGACTTCCAGGTAGACCAGCGGTCGCTAAGTCCATCGGAGAAGGGCCGAAACCCGAAGGAAAGGAACCATGCATCTCGTGGGTCAAGGACTCTGAGGGCCAATAGCCGTAGTCCATCAAGGTCGCATTCACAATCCTATGGTTTTCAGAACATGGATGTAAGCCACAATGCTGGATGTAAGCCAACTGAGTGTCAAAGTCTAATGCATAATGCAGTGATAGAAACAGTTCTTCCTTTACAGAACATGGAAGTGCAGTGTTTGCTCTGA
Protein:  
MPRHRSRSRSYSPGRRSRTPPRGRKRYDDEGRHRDTRSYRDRRSPASSGLLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYRYGEDAAEAKKRMDHKIIGGREIRIVFAEENRKTPQEMRRTPRTSDRHGGSHGGRTPPRSPRHRYRSYSRSPSPARHDSRDRGVKEDYCSPRRSRSISRSRSPRDERDFQVDQRSLSPSEKGRNPKERNHASRGSRTLRANSRSPSRSHSQSYGFQNMDVSHNAGCKPTECQSLMHNAVIETVLPLQNMEVQCLL